eelbrain.pipeline.SubParc

class eelbrain.pipeline.SubParc(base, labels, views=None)

A subset of labels in another parcellation

Parameters:

  • base (str) – The name of the parcellation that provides the input labels. A common base is the 'aparc' parcellation [1].

  • labels (tuple of str) – Labels to copy from base. In order to include a label in both hemispheres, omit the *-hemi tag. For example, with base='aparc', labels=('transversetemporal',) would include the transverse temporal gyrus in both hemisphere, whereas labels=('transversetemporal-lh',) would include the transverse temporal gyrus of only the left hemisphere.

  • views (sequence of str) – Views shown in anatomical plots, e.g. ("medial", "lateral").

See also

MneExperiment.parcs

Examples

Masks for temporal and frontal lobes:

parcs = {
    'STG': SubParc('aparc', ('transversetemporal', 'superiortemporal')),
    'IFG': SubParc('aparc', ('parsopercularis', 'parsorbitalis', 'parstriangularis')),
    'lateraltemporal': SubParc('aparc', (
        'transversetemporal', 'superiortemporal', 'bankssts',
        'middletemporal', 'inferiortemporal')),
}

References