eelbrain.pipeline.MneExperiment.make_report_rois

MneExperiment.make_report_rois(self, test, parc=None, pmin=None, tstart=None, tstop=None, samples=10000, baseline=True, src_baseline=False, redo=False, **state)

Create an HTML report on ROI time courses

Parameters:
test : str

Test for which to create a report (entry in MneExperiment.tests).

parc : str

Parcellation that defines ROIs.

pmin : None | scalar, 1 > pmin > 0 | ‘tfce’

Equivalent p-value for cluster threshold, or ‘tfce’ for threshold-free cluster enhancement.

tstart : scalar

Beginning of the time window for the test in seconds (default is the beginning of the epoch).

tstop : scalar

End of the time window for the test in seconds (default is the end of the epoch).

samples : int > 0

Number of samples used to determine cluster p values for spatio- temporal clusters (default 1000).

baseline : bool | tuple

Apply baseline correction using this period in sensor space. True to use the epoch’s baseline specification (default).

src_baseline : bool | tuple

Apply baseline correction using this period in source space. True to use the epoch’s baseline specification. The default is to not apply baseline correction.

redo : bool

If the target file already exists, delete and recreate it.

State parameters.

See also

load_test
load corresponding data and tests (use data="source.mean")