eelbrain.pipeline.MneExperiment.load_epochs

MneExperiment.load_epochs(self, subjects=None, baseline=False, ndvar=True, add_bads=True, reject=True, cat=None, decim=None, pad=0, data_raw=False, vardef=None, data='sensor', trigger_shift=True, tmin=None, tmax=None, tstop=None, interpolate_bads=False, **state)

Load a Dataset with epochs for a given epoch definition

Parameters:
subjects : str | 1 | -1

Subject(s) for which to load data. Can be a single subject name or a group name such as 'all'. 1 to use the current subject; -1 for the current group. Default is current subject (or group if group is specified).

baseline : bool | tuple

Apply baseline correction using this period. True to use the epoch’s baseline specification. The default is to not apply baseline correction.

ndvar : bool | ‘both’

Convert epochs to an NDVar (named ‘meg’ for MEG data and ‘eeg’ for EEG data). Use ‘both’ to include NDVar and MNE Epochs.

add_bads : bool | list

Add bad channel information to the Raw. If True, bad channel information is retrieved from the bad channels file. Alternatively, a list of bad channels can be specified.

reject : bool | ‘keep’

Reject bad trials. If True (default), bad trials are removed from the Dataset. Set to False to ignore the trial rejection. Set reject='keep' to load the rejection (added it to the events as 'accept' variable), but keep bad trails.

cat : sequence of cell-names

Only load data for these cells (cells of model).

decim : int

Data decimation factor (the default is the factor specified in the epoch definition).

pad : scalar

Pad the epochs with this much time (in seconds; e.g. for spectral analysis).

data_raw : bool

Keep the mne.io.Raw instance in ds.info['raw'] (default False).

vardef : str

Name of a test defining additional variables.

data : str

Data to load; ‘sensor’ to load all sensor data (default); ‘sensor.rms’ to return RMS over sensors. Only applies to NDVar output.

trigger_shift : bool

Apply post-baseline trigger-shift if it applies to the epoch (default True).

tmin : scalar

Override the epoch’s tmin parameter.

tmax : scalar

Override the epoch’s tmax parameter.

tstop : scalar

Override the epoch’s tmax parameter as exclusive tstop.

interpolate_bads : bool

Interpolate channels marked as bad for the whole recording (useful when comparing topographies across subjects; default False).

Applicable State Parameters: